André Veríssimo

Desktop chat client for Google Hangouts

Web application that manages experimental data from lab and performs data-modeling

Firefox addon to open selected links in new tabs

Genomic data from TCGA ready to be used (organized per tissue type and in matrix form)

An R :package: that contains a wide set of useful functions for data science and survival analysis

Workflow to accelerate the annotation of unkown coding sequences

COVID-19 District level data from Robert Koch Institute in Germany

Finds the longest orfs in a nucleotide sequence.

discontinued: check averissimo/tcga.data with the updated repository

MIMIC Code Repository: Code shared by the research community for the MIMIC-III database

Regular expression for matching URLs

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Faster parallelization of Cox models

Another analysis of the covid-19 daily data with hospital beds (and nurses) vs. cases

Public website of André Veríssimo

This is an example application for https://github.com/averissimo/write2sheet

Unbound DNS Server Docker Image

Cool tricks to remember

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Firefox addon for opening links in active tab

Octave/Matlab toolbox that performs parameters estimation on algebraic or differential equations

R script for nlmeODE's paper function calls

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CDISC Analysis Results Data

Presentation-Ready Data Summary and Analytic Result Tables

End to end examples of pharmaverse packages for common safety clinical reporting analyses

A revised version of the teal framework with added flexibility features.

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Gets wave forecast for portugal (official IPMA source)

VS Code extension that adds a right-click "Open Terminal Here" option to folders/files in Explorer and a Ctrl+Shift+T keyboard shortcut to open terminal at current file's directory. Streamlines developer workflow by eliminating navigation steps when working in complex project structures.

An R 📦 to make testing 😀

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📮 Untangle your GitHub Notifications

Simple Node.js library to write to Google Sheets

For the r-universe

Downloads latest atom release and extracts to directory

Easily insert FontAwesome icons into R Markdown docs and Shiny apps

Easy logging of users activity and session events of your Shiny App

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Shorten URLs in Firefox (Compatible with Firefox 57+)

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Create and preview reports with Shiny modules

Open new tabs to the right of the current one.

Reproducible slice module for teal applications

Fast and versatile argument checks

Data model for teal applications

An opinionated R package template with CI/CD built-in

Find differences between R objects

Exploratory Web Apps for Analyzing Clinical Trial Data

A Gallery of Exploratory Web Apps used for Analyzing Clinical Trial Data

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A lightweight, modern and flexible, log4j and futile.logger inspired logging utility for R

Lib to get stats from raspberry pi (system and influxdb)

shiny widgets for teal applications

Provides teal modules for the standard clinical trials outputs

Logging setup for the teal family of packages

Github Action to check if R package works correctly with minimum version of dependencies installed

Create random CDISC data

Generic programming with typed R vectors

Non-invasive pretty printing of R code

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A depository for previously released R packages stemming from this organization.

Tools to build CDISC compliant data sets and check for CDISC compliance.

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Personal configurations for ubuntu/gnome environment

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batch trancompile video files

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R package that downloads and keeps Portugal's data on COVID-19

Download and install latest rstudio preview

Github action to build a Rmd site from an R package vignettes folder

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Supplementary Material from André Veríssimo's PhD Thesis

A Ruby static code analyzer, based on the community Ruby style guide.

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google hangouts client library for nodejs

Gain the full power of DNS-over-TLS forwarding by combining Stubby with Unbound

Docker-compose files for a simple InfluxDB + Grafana stack

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A python daemon to send Pi-Hole stats for Grafana to InfluxDB

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Docker image for Meteor.

Keeping alive a connection by reconnect to wireless network in case of breakdown of gateway

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Package and distribute your Electron app with OS-specific bundles (.app, .exe etc) via JS or CLI

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Docker image to build YakYak

A dead simple Dark Sky API wrapper for Nodejs using method chaining and promises.

Generic functions to tcga.data packages in averissimo/tcga.data

A Node.js module for sending notifications on native Mac, Windows and Linux (or Growl as fallback)

Clone to try a simple Electron app

An R :package: for network-based and sparse generalized linear models (GLM)

TCGAbiolinks

Structure learning for Bayesian networks using the CCDr algorithm.

Software for learning sparse Bayesian networks

An r-package with a collection of useful function I like to use

Twitter Container isolates your Twitter activity from the rest of your web activity in order to prevent Twitter from tracking you outside of the Twitter website via third party cookies

Docker image to run tor

CUDA miner project, compatible with most nvidia cards

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The hackable text editor

Fork to reproduce electron issue #8525

Node.js wrapper for the Google Contacts API (uses OAuth 2.0 token authentication)

General notes and tips on R

Moka Icon Theme

Simple Gtk# Paint Program

Build cross platform desktop apps with JavaScript, HTML, and CSS

A logging package in R similar to log4j

experiências

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Find out all nucleotide sequences from protein sequence

The source repository of the Metanome tool

trunk

Random set of experiments in R

Tools based on travelling ruby to package MassBlast

bioruby

Code for GenBench: Real-World Genomics Benchmarks

Authorization Gem for Ruby on Rails.

Searchs independent search term against KEGG and GeneBank (NCBI)

Deletes files remotely and uploads remote files to dropbox

Monte carlo simulation examples

Personal libraries

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Testing ODE models in SBPOP

Dropbox script that crawls all subdirectories of parent and will download all files

Automatic TV episode file renamer, uses data from thetvdb.com via tvdb_api

A simple, Git-powered wiki with a sweet API and local frontend.