Gustavo Madeira Santana

ciao

49 repos
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hi. i'm gustavo madeira santana. i'm a phd candidate in the emonet lab at yale university studying the neural basis of olfactory navigation in fruit flies. i'm broadly…

hi. i'm gustavo madeira santana.

i'm a phd candidate in the emonet lab at yale university studying the neural basis of olfactory navigation in fruit flies. i'm broadly interested in how sensory information is integrated in the brain and used in decision-making.

!bs
!ma
!phd

![website](https://gumadeiras.com)
![scholar](https://scholar.google.com/citations?user=L603SPwAAAAJ)
![twitter](https://twitter.com/gumadeiras)
![email](mailto:[email protected])

stuff i use(d)

life

🦞 openclaw (maintainer) - personal AI assistant you run on your own devices
📧 fruitmail — cli for fast sqlite-based search for apple mail with body content support
🌡️ anovabar — Bluetooth control for Anova cookers, with a macOS menu bar app and a Rust CLI
🖥️ roku-cli — control roku devices from the terminal (+ interactive mode or HTTP bridge)
🤖 tokito — AI provider token-usage tracking; raycast extension
🚂 gotrain — cli for nyc train arrivals/departures/alerts (mta, lirr, metro-north)
🍿 office-quotes-cli — the office quotes cli with offline + online mode
🧰 dotfiles — brew, zsh, terminal, macOS, and agent workflow setup
🧃 tokenjuice (contributed) — lean output compaction for terminal-heavy agent workflows
👯 doppelganger (contributed) — find duplicate PRs through embedding visualization

science(tools)

🗺️ lobemap — Drosophila antennal lobe atlas viewer and reference tables
📚 zot — small Rust CLI for Zotero libraries; search/open PDFs, add items, and JSON I/O
🍇 fruitloops — query connectome analysis tables from hemibrain and FlyWire
🧬 bdsc — sync and query Bloomington Drosophila Stock Center datasets locally
🪰 flybase — FlyBase bulk-file sync/query helper for agent workloads
💡 flylight — search and query Janelia FlyLight Split-GAL4 resources locally
🧫 orthodb — cache OrthoDB flat files and query ortholog groups via local data or API

science(experiments)

🎙️ vocalmat — analysis of mice ultrasonic vocalizations using computer vision and machine learning
🎤 vocalpy — detection, classification, and segmentation of animal vocalizations
🐭 squeakout — autoencoder-based segmentation of mouse ultrasonic vocalizations
🔬 twopy — two-photon imaging analysis with HDF5 conversion, napari ROI editing, and response plots
🐾 optogui (closed source) — python framework for optogenetic experiments with real-time behavior tracking, closed-loop stimulation, and data visualization
🧠 zona incerta social behavior — dimensionality reduction and vocal clustering analysis in mice

some papers

visual neurons for distance estimation! sep 2025
neurons for divergent odor-coding dynamics! jun 2025
age-specific social neurons in mice may 2025
fly adaptive navigation strategies mar 2025
neurons for mother–baby bonding! jul 2024
squeakout, autoencoder for vocal segmentation apr 2024

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*the brain is "a riddle wrapped in a mystery inside an enigma."*

All public repos (49)

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