Kara Woo

Example dockerfiles for plumber, shiny, and quarto

Slides from my talk, "Box plots: a case study in debugging and perseverance" presented at rstudio::conf 2019

A sickeningly awesome geom.

Materials for a short course on reproducible research with R at SDSS 2019

Slides for my CascadiaRConf keynote

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Various helpful (to me) R functions

QA/QC for under-ice ecology synthesis data

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Star Trek functions in R

Advent of Code solutions

Prelude is an enhanced Emacs 24 distribution that should make your experience with Emacs both more pleasant and more powerful.

My little black bartending book

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Software Carpentry workshop at Washington State University

My personal website

code from Cascadia R Conf Building R Based R Packages workshop

My blog (but not the main website karawoo.com - that's a separate repo)

A Robust, High Performance JSON Parser and Generator for R

"What They Forgot to Teach You About R" website / eBook

awardFindR scans multiple online grant databases for relevant awards

Tools to make an R developer's life easier

Basic structure of a R Shiny application for use on Synapse

An implementation of the Grammar of Graphics in R

Easily install and load packages from the tidyverse

A functional programming toolkit for R

Python-driven resume/curriculum vitae with Jinja templates.

LaTeX class to format homework assignments written in org-mode

:chart_with_upwards_trend::heart_eyes_cat: Emoji in ggplot2 :heart_eyes_cat::chart_with_upwards_trend:

ESA 2014, Data Visualization in R workshop

Data Carpentry R lessons on ecology

Extend Tableau dashboards using Shiny

An emacs major mode for managing coding agents

httr: a friendly http package for R

Open-source scientific and technical publishing system built on Pandoc.

Low-level API for programming with R

Set up commonly used 📦 components

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Templates for Shiny for Python

exercises from the Cascadia R Conf Intro to Rust for R Developers workshop

Workshop materials for Intro to Rust for R Developers and Building Rust Based R packages.

An R interface to the MEME Suite

Dependency-free implementation of Optional & Result types in R

Static Code Analysis for R

Turn R scripts into terminal screencasts

Call R from R

GeoLift is an end-to-end geo-experimental methodology based on Synthetic Control Methods used to measure the true incremental effect (Lift) of ad campaign.

Install R packages from GitHub, GitLab, Bitbucket, git, svn repositories, URLs

Advent of Code 2023

A DBI-compliant interface to PostgreSQL

Validate data, metadata, and annotations

Advent of Code 2022

Automation for the Sage AWS org-sagebase-sandbox account

Repository for the R Contribution Working Group, working on initiatives to encourage new contributor to R core

R Weekly

Graphical scales

R library to allow tests and reference values for R packages to be specfied in JSON format

㊙️ Operations security for R developers

Sage-branded plot themes

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Live view of projects of funding partners

Materials for rstudio::conf

Sage Bionetworks derived standards for annotating content in Synapse.

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SysBio DCC JSON schemas

An R package providing programmatic access to Synapse

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Slides for my Amherst STAT495 guest talk

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RNASeq normalization pipeline with R

An service to auto provision resources on AWS scicomp

Validation and processing of GENIE files

Creates Reports From Synapse Submission Forms

Programmatic interface to Synapse services for Python

Synapse R challenge utility functions. (wraps challengeutils)

Tools for data curation.

Modeling COVID-19 epidemic

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Tools for creating tuning parameter values

Visual regression testing and graphical diffing with testthat

Tidyverse developer day

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Creation of Air Zone reports for reporting achievement of Canadian Ambient Air Quality Standards

Activity prompt for "What They Forgot To Teach You About R" workshop

Source + slides for rstudio::conf(2020) presentation

Using Git and GitHub with R, Rstudio, and R Markdown

Reusable assets and notes for "What They Forgot ..." workshops

Activity prompt for "What They Forgot To Teach You About R" workshop

Allows for monitoring of data uploaded via the dccvalidator application. Functions for getting information on the uploaded files, metadata validation status, and more.

code for managing data coordinating operations through Synapse

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What They Forgot to Teach You About R, 2019 January 15/16 @ rstudio::conf

An example app for illustrating golem features

A Synapse annotations automation tool.

Decision-aid for crop producers in the Columbia Basin.

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Experimenting with R Shiny.

Push Synapse fileview to a Synapse table with additional notation

A backend for selecting functions of the tidyverse

R Community Diversity and Inclusion Working Group (RCDI-WG)

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Advanced R: a book

Based off of PythonInR (https://bitbucket.org/Floooo/pythoninr/) but includes a standalone, compiled from source python instead of relying on the python installed on the host machine

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MetaDIG client package for R

Polymodes for the R language

R scripts to calculate the Canadian Ambient Air Quality Standards (CAAQS) for fine particulate matter (PM2.5) for B.C. published on Environmental Reporting BC

Python Package to view and analyze schemas defined in schema.org way

R scripts to calculate the Canadian Ambient Air Quality Standards (CAAQS) for Ozone for B.C. published on Environmental Reporting BC

Materials for the Intermediate Shiny Workshop at RStudio Conf 2019

talk with NCBI entrez using R

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An R interface to open-access malaria data, hosted by the Malaria Atlas Project.

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Synapse documentation pages

An R package to enable data processing and packaging outside the usual R package build procedure.

:heavy_check_mark::interrobang: Validate JSON

A set of comprehensive Emacs color themes based on Chris Kempson's 'tomorrow' themes

an R package for generating and working with codemeta

LaCroix Color Palettes for R.

Implementation of the Matplolib 'viridis' color map in R (lite version)

Annotation manifest generator

Cascadia R Conf

R Interface to Python

A style guide for the R language

Tidy data structures, summaries, and visualisations for missing data

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Intermediate git workshop

Source code for tidyverse.org

Repo where we can have the Rmd until it's publication ready

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A Romper Zone

Cython implementations of Gibbs sampling for supervised LDA

Just the Worst of Times

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Materials from WSU Software Carpentry workshop

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Introduction to R for non-programmers using gapminder data.

Slides for my talk on the Open Science Framework

R for data science

Software Carpentry instructor training course

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UW eScience DSSG 2016 blog.

Config File for Blabs, who is a Chat Bot

A repository for the 10 simple rules data sharing paper to be submitted to PLoS Comp Biology

Comparison of R Markdown and Emacs Org-mode for reproducible reports

Assignment 3: creating interactive visualization software

Assignment 2: exploratory data analysis

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Assignment 1: Visualization Design

For deploying apps running on R's "Shiny" web framework

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Interface to Flickr from R

company-mode backend for emoji

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Shiny app to view timetables for the hydrofoil from Irkutsk to Bol'shie Koty

Git development branch

R code for pulling temperature and precipitation data from CRU

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Tiny Little Blogging Tools in Fabric

Automate export (PDF, HTML, etc.) of Org documents

Slides for my talk at IAGLR

Materials from WSU Software Carpentry workshop

Emacs Color Theme

Software Carpentry introduction to R for novices using inflammation data.

Template for remixable lessons.

Software Carpentry web site.

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ORD - introR

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Data Carpentry workshop materials

Some code to aggregate data for under ice ecology synthesis

Template for Software Carpentry bootcamp site repository.

Software Carpentry UW