2-day longest streak
Hi there 👋 <!-- chrisgorgo/chrisgorgo is a ✨ _special_ ✨ repository because its README.md (this file) appears on your GitHub profile. Here are some ideas to get you started: 🔭…
Hi there 👋
<!--
chrisgorgo/chrisgorgo is a ✨ _special_ ✨ repository because its README.md (this file) appears on your GitHub profile.
Here are some ideas to get you started:
- 🔭 I’m currently working on ...
- 🌱 I’m currently learning ...
- 👯 I’m looking to collaborate on ...
- 🤔 I’m looking for help with ...
- 💬 Ask me about ...
- 📫 How to reach me: ...
- 😄 Pronouns: ...
- ⚡ Fun fact: ...
-
openneuro ★ PINNED ⑂
A free and open platform for analyzing and sharing neuroimaging data
JavaScript ★ 1 8y agoExplain → -
NeuroVault ★ PINNED ⑂
Easy to use web database for statistical maps.
Python ★ 0 6y agoExplain → -
fmriprep ★ PINNED ⑂
fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.
Python ★ 0 7y agoExplain → -
nipype ★ PINNED ⑂
Pipelines and interfaces for neuroimaging packages
Python ★ 6 7y agoExplain → -
mriqc ★ PINNED
No description.
Python ★ 1 11y agoExplain → -
alleninf
Compare a statistical map of a brain with gene expression patterns from Allen Human Brain Atlas.
Python ★ 33 8y agoExplain → -
Adaptive-Thresholding
Combination of Gamma Gaussian Mixture model and topological FDR for thresholding fMRI statistical maps.
Matlab ★ 17 13y agoExplain → -
pypls
Partial Least Squares with permutation and bootstrap tests in python
Python ★ 7 9y agoExplain → -
neurodatafame
Neuroimaging Data Sharing Hall of Fame
Python ★ 4 14y agoExplain → -
zenodo.js
JavaScript library for interacting with Zenodo API
JavaScript ★ 2 8y agoExplain → -
slice_leakage
Comparison of 1D GRAPPA, split-slice GRAPPA and three different calibration scans using MRIQC
HTML ★ 2 7y agoExplain → -
experiments
Collections of notebooks with machine learning experiments
Jupyter Notebook ★ 2 7y agoExplain → -
BIDS-examples-1 ⑂
A set of BIDS compatible datasets with empty nifti files that can be used for testing software.
★ 2 8y agoExplain → -
tau2-bench ⑂
τ²-Bench: Evaluating Conversational Agents in a Dual-Control Environment
★ 1 8mo agoExplain → -
fmri-analysis-vm ⑂
A VM setup for use in fMRI analysis and education
Python ★ 1 11y agoExplain → -
fmri_tumour
No description.
Python ★ 1 3y agoExplain → -
peaks2maps ⑂
No description.
Jupyter Notebook ★ 1 8y agoExplain → -
FaceForensics ⑂
Github of the FaceForensics dataset
★ 1 6y agoExplain → -
bids-specification ⑂
Brain Imaging Data Structure (BIDS) Specification
★ 1 7y agoExplain → -
pybids ⑂
Python package to access BIDS datasets (yet to get going)
Python ★ 1 8y agoExplain → -
bids-validator ⑂
No description.
JavaScript ★ 1 7y agoExplain → -
pypreprocess ⑂
Preprocessing scripts for neuro imaging
Python ★ 1 9y agoExplain → -
docker-for-scientists
No description.
JavaScript ★ 1 10y agoExplain → -
freshMRI ⑂
a collection of resources to set up a neuroimaging data analysis environment
HTML ★ 1 10y agoExplain → -
bids-examples
No description.
★ 1 10y agoExplain → -
BIDS-models
No description.
★ 1 10y agoExplain → -
nipy ⑂
Neuroimaging in python
C ★ 1 14y agoExplain → -
wyzeapy ⑂
No description.
★ 0 2mo agoExplain → -
gemini-cli ⑂
An open-source AI agent that brings the power of Gemini directly into your terminal.
★ 0 1y agoExplain → -
OSWorld ⑂
OSWorld: Benchmarking Multimodal Agents for Open-Ended Tasks in Real Computer Environments
★ 0 1y agoExplain → -
streamlit-echarts-demo ⑂
Demo for Streamlit ECharts component
Python ★ 0 2y agoExplain → -
chrisgorgo
No description.
★ 0 3y agoExplain → -
Home_Assistant_NeoSmartBlinds ⑂
Adds NeoSmart Blinds support to Home-Assistant.
★ 0 3y agoExplain → -
heudiconv-joss-paper ⑂
Repository to prepare HeuDiConv paper
★ 0 3y agoExplain → -
ARN3
AI Response to Reviewer Number 3
Dockerfile ★ 0 3y agoExplain → -
chrisgorgo.github.io
No description.
SCSS ★ 0 4y agoExplain → -
mriqcwebapi ⑂
No description.
Python ★ 0 7y agoExplain → -
mriqc-1 ⑂
The package provides a series of image processing workflows to extract and compute a series of NR (no-reference), IQMs (image quality metrics) to be used in QAPs (quality assessment protocols) for MRI (magnetic resonance imaging).
Jupyter Notebook ★ 0 8y agoExplain → -
nodeapi ⑂
node based API for COINS
JavaScript ★ 0 10y agoExplain → -
metacurious
prototype of a browser based literature review tool
★ 0 8y agoExplain → -
denoiser ⑂
No description.
Python ★ 0 5y agoExplain → -
bids2datapackage
Automatic creation of datapackage.json formatted according to https://frictionlessdata.io/specs/data-package/
Python ★ 0 7y agoExplain → -
OpenSesame ⑂
Graphical experiment builder for the social sciences
Python ★ 0 12y agoExplain → -
aws-cli ⑂
Containerized AWS CLI on alpine to avoid requiring the aws cli to be installed on CI machines.
Shell ★ 0 8y agoExplain → -
docker-stacks ⑂
Ready-to-run Docker images containing Jupyter applications
Python ★ 0 6y agoExplain → -
covid-19-data ⑂
COVID-19 datasets are constructed entirely from primary (government and public agency) sources
★ 0 6y agoExplain → -
data-pipeline-samples ⑂
This repository hosts sample pipelines
Python ★ 0 10y agoExplain → -
DeepDeface ⑂
Python package for automatic removal of facial features via deep learning
Python ★ 0 7y agoExplain → -
C-PAC ⑂
Configurable Pipeline for the Analysis of Connectomes
Python ★ 0 13y agoExplain → -
yellowbrick ⑂
Visual analysis and diagnostic tools to facilitate machine learning model selection.
★ 0 6y agoExplain → -
beam ⑂
Apache Beam is a unified programming model for Batch and Streaming
★ 0 6y agoExplain → -
niworkflows ⑂
Common workflows for MRI (anatomical, functional, diffusion, etc)
Python ★ 0 7y agoExplain → -
staged-recipes ⑂
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python ★ 0 6y agoExplain → -
nifti_clib ⑂
C libraries for NIFTI support
★ 0 6y agoExplain → -
nibabel ⑂
Python package to access a cacophony of neuro-imaging file formats
★ 0 6y agoExplain → -
abseil-cpp ⑂
Abseil Common Libraries (C++)
★ 0 6y agoExplain → -
dstc8-schema-guided-dialogue ⑂
No description.
★ 0 6y agoExplain → -
coinstac-1 ⑂
Documentation for the COINSTAC ecosystem.
★ 0 10y agoExplain → -
abulak_demo
Make Mathematics Great Again
Python ★ 0 9y agoExplain → -
open-brain-consent ⑂
Collect samples and formalize an ultimate subject consent form for brain imaging studies
★ 0 3y agoExplain → -
bolognese ⑂
Ruby gem and command-line utility for conversion of DOI metadata
Ruby ★ 0 7y agoExplain → -
zenodo ⑂
Research. Shared.
Python ★ 0 7y agoExplain → -
scipy ⑂
Scipy library main repository
Python ★ 0 7y agoExplain → -
narrativeqa ⑂
No description.
Shell ★ 0 7y agoExplain → -
natural-questions ⑂
No description.
Python ★ 0 6y agoExplain → -
mathematics_dataset ⑂
No description.
Python ★ 0 7y agoExplain → -
quickdraw-dataset ⑂
Documentation on how to access and use the Quick, Draw! Dataset.
★ 0 7y agoExplain → -
schema_in_markdown_test
No description.
★ 0 7y agoExplain → -
scikit-learn ⑂
scikit-learn: machine learning in Python
Python ★ 0 7y agoExplain → -
hospital-chargemaster-analysis ⑂
example (fun!) analysis with hospital chargemaster data
Jupyter Notebook ★ 0 7y agoExplain → -
tech-interview-handbook ⑂
💯 Algorithms study materials, behavioral content and tips for rocking your coding interview
JavaScript ★ 0 7y agoExplain → -
SomeGiraffeExample ⑂
A test project of a giraffe analysis project
Python ★ 0 7y agoExplain → -
test_porcupine
No description.
★ 0 7y agoExplain → -
jupyter-edu-book ⑂
Teaching and Learning with Jupyter
TeX ★ 0 7y agoExplain → -
singularity-python ⑂
command line tool for working with singularity hub and singularity containers
Python ★ 0 10y agoExplain → -
brain-networks-course ⑂
Repo for Brain Networks course
Jupyter Notebook ★ 0 7y agoExplain → -
kaggle-api ⑂
Official Kaggle API
Python ★ 0 7y agoExplain → -
docker-python ⑂
Kaggle Python docker image
Dockerfile ★ 0 7y agoExplain → -
bidscoin ⑂
Maps source-level neuroimaging data onto a BIDS data structure
Python ★ 0 7y agoExplain → -
multibandCFtests
No description.
HTML ★ 0 7y agoExplain → -
remark-lint ⑂
Markdown code style linter
JavaScript ★ 0 8y agoExplain → -
openfmri2bids ⑂
Convert OpenfMRI dataset to BIDS.
Python ★ 0 10y agoExplain → -
BIDS ⑂
Brain Imaging Data Structure
CSS ★ 0 8y agoExplain → -
dataportals.org ⑂
Open Data Portals and Sites around the world
HTML ★ 0 7y agoExplain → -
nii_extension ⑂
nii jupyter extension using papaya viewer
TypeScript ★ 0 8y agoExplain → -
python_testing_nhw17
No description.
Python ★ 0 8y agoExplain → -
testing_tutorial
No description.
★ 0 8y agoExplain → -
community-starter-kit
No description.
★ 0 8y agoExplain → -
training-kit ⑂
Open source on demand courses and cheat sheets for Git and GitHub
HTML ★ 0 8y agoExplain → -
chrisfilo.github.io
No description.
HTML ★ 0 8y agoExplain → -
test333
No description.
★ 0 8y agoExplain → -
test666
No description.
★ 0 8y agoExplain → -
test33
No description.
★ 0 8y agoExplain → -
test67
No description.
★ 0 8y agoExplain → -
upload_test_26
No description.
★ 0 8y agoExplain → -
mriqc_test_5
No description.
★ 0 8y agoExplain → -
mriqc_test_6
No description.
★ 0 8y agoExplain → -
mriqc_test5
No description.
HTML ★ 0 8y agoExplain → -
mriqc_test4
No description.
★ 0 8y agoExplain → -
mriqc_test3
No description.
★ 0 8y agoExplain → -
mriqc_test_upload2
No description.
★ 0 8y agoExplain → -
mriqc_upload_test
No description.
★ 0 8y agoExplain → -
github_pages_uploader
Command line tool and Python library for uploading files to GitHub Pages.
Python ★ 0 8y agoExplain → -
test_upload
No description.
★ 0 8y agoExplain → -
octoshare_test
No description.
HTML ★ 0 8y agoExplain → -
pygithub_test2
No description.
★ 0 8y agoExplain → -
pygithub_test
No description.
★ 0 8y agoExplain → -
blueprint-resourcesharing ⑂
Template resource sharing plans for grant applications
★ 0 8y agoExplain → -
neurovault_data ⑂
Installation data and other files for NeuroVault.
★ 0 8y agoExplain → -
templates
No description.
★ 0 8y agoExplain → -
NiMARE ⑂
Coordinate- and Image-based meta-analysis in Python
Python ★ 0 7y agoExplain → -
pyBIDSconv ⑂
GUI based converter for MR dicoms to BIDS structure
Python ★ 0 8y agoExplain → -
pydeface ⑂
defacing utility for MRI images
Python ★ 0 8y agoExplain → -
cbrain_bids_apps_runner
No description.
Python ★ 0 8y agoExplain → -
CONSNet ⑂
CONSNet: Convolutional Neural Networks for Skull-stripping in Brain MR Imaging using Consensus-based Silver Standard Masks
Python ★ 0 8y agoExplain → -
open-data-registry ⑂
A registry of publicly available datasets on AWS
Python ★ 0 7y agoExplain → -
freya ⑂
Issues and milestones for the FREYA project
★ 0 8y agoExplain → -
marvin
No description.
Python ★ 0 8y agoExplain → -
ciftify ⑂
The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
Python ★ 0 8y agoExplain → -
testingdatalad2
No description.
★ 0 8y agoExplain → -
dataladtesting
No description.
★ 0 8y agoExplain → -
boutiques ⑂
JSON schema and tools for boutiques application descriptors.
★ 0 8y agoExplain → -
node-ignore ⑂
🔍 node-ignore is the manager and filter for .gitignore rules.
JavaScript ★ 0 8y agoExplain → -
peaks2maps.nhw
No description.
Python ★ 0 9y agoExplain → -
DPARSF ⑂
No description.
Matlab ★ 0 8y agoExplain → -
tensorflow ⑂
Computation using data flow graphs for scalable machine learning
C++ ★ 0 8y agoExplain → -
me-ica ⑂
Core code for ME-ICA command line interface
Python ★ 0 8y agoExplain → -
BrainsForPublication ⑂
Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon
Jupyter Notebook ★ 0 8y agoExplain → -
glaswegian_extravaganza
alonzi
Python ★ 0 8y agoExplain → -
git_demo
No description.
Python ★ 0 8y agoExplain → -
nhw2017 ⑂
No description.
CSS ★ 0 9y agoExplain → -
python_testing
No description.
Python ★ 0 9y agoExplain → -
ANTs ⑂
Advanced Normalization Tools (ANTs)
C++ ★ 0 8y agoExplain → -
brainhack_mx15_bids
BIDS abstract for work done during Brainhack MX 2015
TeX ★ 0 10y agoExplain → -
BEGAN-tensorflow ⑂
python3 / Implementation of Google Brain's BEGAN in Tensorflow
Python ★ 0 9y agoExplain → -
coinstac
Collaborative Informatics and Neuroimaging Suite Toolkit for Anonymous Computation
JavaScript ★ 0 10y agoExplain → -
cbstools-public ⑂
Open copy of the CBS Tools software repository
Java ★ 0 9y agoExplain → -
openMorph ⑂
Curated list of open-access databases with human structural MRI data
★ 0 8y agoExplain → -
pandas ⑂
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
Python ★ 0 9y agoExplain → -
factory_girl_rails ⑂
Factory Girl ♥ Rails
Ruby ★ 0 9y agoExplain → -
dipy-feedstock ⑂
A conda-smithy repository for dipy.
Shell ★ 0 9y agoExplain → -
BBSRC-git-demo
No description.
R ★ 0 9y agoExplain → -
reproducible-workflows ⑂
Materials for BBSRC Meeting presentation on reproducible workflows
R ★ 0 9y agoExplain → -
dockereve ⑂
Dockerized Python Eve sample project (Nginx + Gunicorn + Eve)
Python ★ 0 10y agoExplain → -
zenodo_test
No description.
★ 0 9y agoExplain → -
ds000114 ⑂
Demo derived dataset based on OpenfMRI ds000114
Batchfile ★ 0 9y agoExplain → -
workshops ⑂
Brain imaging workshops
Jupyter Notebook ★ 0 9y agoExplain → -
nipype_tutorial ⑂
Learn Nipype with these tutorial notebooks - go here to see them online -->
Jupyter Notebook ★ 0 9y agoExplain → -
nipype_course ⑂
No description.
Python ★ 0 9y agoExplain → -
toms_data_evaluation
No description.
HTML ★ 0 9y agoExplain → -
demo_sans
No description.
Python ★ 0 9y agoExplain → -
psychologyidol
No description.
★ 0 8y agoExplain → -
ICA-AROMA ⑂
Software package of ICA-AROMA; a data-driven method to identify and remove motion-related independent components from functional MRI data.
Python ★ 0 9y agoExplain → -
rocker ⑂
R configurations for Docker
Shell ★ 0 9y agoExplain → -
crn-app-registration-tool ⑂
A tool for building and registering apps into the CRN/Agave framework
Python ★ 0 9y agoExplain → -
dcm2niix ⑂
dcm2nii DICOM to NIfTI converter
C ★ 0 9y agoExplain → -
openfmri ⑂
code related to the OpenFMRI project
Shell ★ 0 10y agoExplain → -
monitor-hcp-pipelines ⑂
No description.
Python ★ 0 10y agoExplain → -
Pipelines-1 ⑂
No description.
Shell ★ 0 10y agoExplain → -
kickass_testing_example
No description.
R ★ 0 10y agoExplain → -
r_testing_nhw
No description.
★ 0 10y agoExplain → -
software-testing-for-scientists
No description.
JavaScript ★ 0 10y agoExplain → -
BROCCOLI ⑂
BROCCOLI: Software for Fast fMRI Analysis on Many-Core CPUs and GPUs
C++ ★ 0 10y agoExplain → -
ndmg ⑂
No description.
TeX ★ 0 8y agoExplain → -
autohotkey-windows-mac-keyboard ⑂
AutoHotkey Mappings to emulate OSX behaviour with a Mac keyboard on Windows
AutoHotkey ★ 0 13y agoExplain → -
grabbit ⑂
get grabby with file trees
Python ★ 0 10y agoExplain → -
imagelayers ⑂
Docker Image Visualization and Badges
Go ★ 0 10y agoExplain → -
example ⑂
This an example app that can serve as a template.
Python ★ 0 9y agoExplain → -
singularity-vagrant ⑂
vagrant containers for quick development on different OS
Ruby ★ 0 10y agoExplain → -
repro-case-studies ⑂
Reproducibility case study contributions
★ 0 11y agoExplain → -
nilearn ⑂
Machine learning for NeuroImaging in Python
Python ★ 0 8y agoExplain → -
nidmviewer ⑂
NIDM Results Viewer
CSS ★ 0 10y agoExplain → -
open_fmri ⑂
Reimplementation of OpenfMRI.org in Django
Python ★ 0 10y agoExplain → -
CMS_nipype
No description.
★ 0 10y agoExplain → -
r_testing
No description.
R ★ 0 10y agoExplain → -
matlab_example
No description.
M ★ 0 10y agoExplain → -
r_example
No description.
R ★ 0 10y agoExplain → -
mail2pdf ⑂
Download gmail mailbox via google takeout and convert mbox formated emails to pdfs
Perl ★ 0 10y agoExplain → -
neuropower ⑂
sample size calculations for fMRI
Python ★ 0 10y agoExplain → -
test_demo
No description.
★ 0 10y agoExplain → -
IntroductionToResearchComputing ⑂
No description.
HTML ★ 0 15y agoExplain → -
pybraincompare ⑂
brain image comparison and visualization methods for python!
HTML ★ 0 8y agoExplain → -
brainhack2015_demo
No description.
★ 0 10y agoExplain → -
nipype-beginner-s-guide ⑂
Beginner's guide for Nipype
Python ★ 0 10y agoExplain → -
heudiconv ⑂
little helper to ease DICOM conversion to ready-to-share folder with heuristics
Python ★ 0 7y agoExplain → -
osf_test
No description.
★ 0 10y agoExplain → -
poSSum ⑂
No description.
Python ★ 0 11y agoExplain → -
nidm-training ⑂
Training materials for learning NIDM
★ 0 11y agoExplain → -
hcp2nipype-hack2015 ⑂
The outcomes of the HCP to Nipype project at the OHBM Hackathon 2015.
Python ★ 0 11y agoExplain → -
pyneurovault ⑂
python wrapper for NeuroVault api (in dev)
Python ★ 0 11y agoExplain → -
fmri-stats ⑂
Teaching code related to fMRI statistics
Python ★ 0 11y agoExplain → -
neurovault_puppet ⑂
Puppet installation and configuration for Neurovault
Puppet ★ 0 11y agoExplain → -
pna2015 ⑂
No description.
★ 0 11y agoExplain → -
gradunwarp ⑂
Gradient Unwarping in Python
Python ★ 0 11y agoExplain → -
nidmresults ⑂
No description.
Python ★ 0 11y agoExplain → -
pipelines ⑂
Neuroimgaing data processing pipelines used in the lab
Python ★ 0 11y agoExplain → -
coupling ⑂
Matlab and Python scripts for calculating functional coupling between time series data
Python ★ 0 11y agoExplain → -
Neurosynth ⑂
NeuroSynth core tools
Python ★ 0 10y agoExplain → -
fMRI_methods_paper
No description.
TeX ★ 0 12y agoExplain → -
pycortex ⑂
Pycortex is a python-based toolkit for surface visualization in fMRI data
Python ★ 0 12y agoExplain →
No repos match these filters.