Edgar Y. Walker Claim this profile

Simple wrapper for docker-compose to use GPU enabled docker under nvidia-docker

Computing V1 population likelihood

Course material for "Deep Learning in Neuroscience" offers as part of Lviv Data Science Summer School 2021.

Docker images for Google TensorFlow, based on Python 3

Searchable Zed editor keyboard-shortcut cheatsheets (default macOS keymap + vim mode) as standalone HTML, plus a curated 2-page PDF quick reference.

v1 uncertainty classification project

A collection of learning resources for Python

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Asynchronous Programming in Rust, published by Packt

Randomized transformation of scattered thoughts in my mind

A Python CLI tool that synchronizes Google Workspace users and groups to GitHub Enterprise using SCIM provisioning. Designed for scheduled batch execution via cron.

Claude Code is an agentic coding tool that lives in your terminal, understands your codebase, and helps you code faster by executing routine tasks, explaining complex code, and handling git workflows - all through natural language commands.

A HashiCorp Vault secrets engine plugin to provision users for the Minio object storage server

The agent harness performance optimization system. Skills, instincts, memory, security, and research-first development for Claude Code, Codex, Opencode, Cursor and beyond.

Prototype of Orcapod as implemented in Python with functions

Personal Claude Code plugin marketplace

Claude Code plugin: Rust learning collaborator that guides understanding instead of writing code

A meta-language for Go that adds Result types, error propagation (?), and pattern matching while maintaining 100% Go ecosystem compatibility

A Python-based module for creating flexible and robust spike sorting pipelines.

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Pushes markdown documents from Github to Notion

Modern REST API Development in Go, Published by Packt

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No-frill Go-based key-value store

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🐶 Kubernetes CLI To Manage Your Clusters In Style!

Block-based storage system written in Rust for learning purposes

Type annotations for pyarrow

Scripts and datasets for the O'Reilly book Python Polars: The Definitive Guide along with my personal notes

A Polars plugin for persistent DataFrame-level metadata

Dataframes powered by a multithreaded, vectorized query engine, written in Rust

Unofficial Apache Arrow crate that aims to standardize stable hashing of structured data

A pragmatic monkey-patching library that transparently redirects Python's standard file operations to FSSpec backends, allowing existing code to work with any filesystem without modification.

Provides a fake file system that mocks the Python file system modules.

Send push notifications to your phone or desktop using PUT/POST

Git Credential Helper for Github Apps

A reverse proxy that provides authentication with Google, Azure, OpenID Connect and many more identity providers.

A collection of Docker base images for use across Enigma projects

A collection of Docker images for various usage

Code from the Kubernetes in Action 2nd Edition book

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GitHub project template for standard Python project with DevContainer

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Docker image for scientific computing with PyTorch

Probabilistic core

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Repository to host materials for the summer workshop on the dynamic brain

Python Implementation of Reinforcement Learning: An Introduction

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A quick repository to test out the git subtree feature

A generalized model fitting pipeline that houses models, trainers, and datasets in datajoint and returns as well as stores trained models.

Collection of pretrained networks in pytorch readily available for transfer learning tasks (e.g. neural system identification)

Mid-Level Visual Representations Improve Generalization and Sample Efficiency for Learning Visuomotor Policies

Tensors and Dynamic neural networks in Python with strong GPU acceleration

Machine Learning Utils of Sinzlab

Schemata and libraries for neuroscientific data

Utility for working with Uni Tübingen Slurm Cluster

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Test out stuff on GitHub

Going beyond BEDMAP2 using a super resolution deep neural network. Also a convenient flat file data repository for high resolution bed elevation datasets around Antarctica.

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Lucid library adapted for PyTorch

Canonical ephys pipeline package - development under U24

Tutorial Documentation https://tutorials.datajoint.io/

Custom iTerm Applescripts for Alfred

Neuro Datasets for System Identification

Build Pytorch image

The official code repository for examples in the O'Reilly book 'Generative Deep Learning'

Documentation of datajoint @ Kavli Institute

Notebooks as I work through the book Generative Deep Learning (by David Foster, O'Reilly 2019)

DataJoint tutorial given in July 2019

High-level relational database interface for MATLAB

Fabric library for Docker GPU deployment

DataJoint pipeline for IBL project

Website for interactions with pipeline.

PyTorch Utilities

MATLAB Live Script demo of working with NWB 2.0 neurodata

Pytorch Implementation for Graph Convolutional Neural Networks

A proposal for data standardization in neurophysiology

Example project for Stackedit

In-browser Markdown editor

Loader for Axona data files

Python library for reading Axona files

Reference deployment of JupyterHub with docker

Documentation https://docs.datajoint.io

Code examples for “Interactive Data Visualization for the Web”

Code repository for the Angular: Up & Running Book, which covers Angular 2+, using TypeScript and more...

Introduction to Scientific Computation in Python for Neuroscientists 2018

Demo project for GitHub for workshop in 2018

Differentiable architecture search for convolutional and recurrent networks

A small package to create visualizations of PyTorch execution graphs

Simple Analysis and visualization of patch clamp electrophysiology data in Python

PyTorch wrapper for FFTs

Trying out Visdom with Docker

Pytorch Implementation of PixelCNN++

Python3 / Tensorflow implementation of PixelCNN++, as described in "PixelCNN++: A PixelCNN Implementation with Discretized Logistic Mixture Likelihood and Other Modifications"

Docker image for PyTorch with Jupyter Notebook

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Bayesian Adaptive Direct Search (BADS) optimization algorithm for model fitting in MATLAB

Analysis code for the results of the spikefinder challenge

A collection of utility functions to send notifications via various methods (e.g. email, slack, twitter, etc)

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Python interface to Graphviz graph drawing package

✔️ Send user verification emails with NodeJS and MongoDB

Continuous builder and binary build scripts for pytorch

A lightweight JavaScript library for creating particles

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Public Slack organizations made easy

ECMAScript 6 Tutorial

Packer config for building Ubuntu 16.04 based AMI for TensorFlow development

Controlling GPU fan speed on a headless linux computer requires spoofing a display.

Docker image for DeepMind Sonnet library

Jupyter version of nndev Docker image

Docker image with multiple major Neural Network packages

:cloud: Easily publish static websites to Amazon S3.

A fully functional local AWS cloud stack. Develop and test your cloud apps offline!

Docker image for Python 2 based development environment

TensorFlow library for Andreas Tolias lab

Data Loader for ImageNet

Docker image for running TensorFlow capable Jupyter Notebook

Non-negativ matrix factorization algorithms for spike/mask inference on 2-photon recordings.

portainer template

Docker image for running TensorBoard.

Models built with TensorFlow

Build and run Docker containers leveraging NVIDIA GPUs

Gated Graph Sequence Neural Networks

Deep Dashboard: Machine Learning Training Visualizer

Codes for Coursera course on AngularJS

Docker image for building TensorFlow from source.

Computation using data flow graphs for scalable machine learning

Simple tutorials using Google's TensorFlow Framework

Docker container based on soumith/imagenet-multiGPU.torch

Docker container for running Jupyter Notebook for Python development

Recurrent Neural Network library for Torch7's nn

92.45% on CIFAR-10 in Torch

A collection of utility classes and functions to be used in working with neural networks

A deep learning library for streamlining research and development using the Torch7 distribution.

Testing environment for lua package creation

Docker image for Python development environment.

Ubuntu based Python image

Dynamic website for MSTP abstract book info collection

Materials and IPython notebooks for "Python for Data Analysis" by Wes McKinney, published by O'Reilly Media

Multi-layer Recurrent Neural Networks (LSTM, GRU, RNN) for character-level language models in Torch

an imagenet example in torch.

Nvidia-docker CUDA enabled Torch container complete with iTorch notebook.

Docker container for running iTorch complete with iTorch notebook capability.

DataJoint schemas for neuroscience data

Docker container with vanilla lua

Repository to test Travis CI

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Manage Docker images for scientific computation Python 3 development enviroment

Monstrous identifier icon creation

A collection of setup scripts

A collection of common analysis methods for neuroscience written in Python

Whole bunch of miscellaneous stuff that still needed to be kept...

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The acquisition architecture

Collection of config files for Mac and Linux

A collection of random Jupyter notes

A sample blog to test out Jekyll with GitHub pages

Pelican plugin for blogging with IPython Notebooks

Static site generator that supports Markdown and reST syntax. Powered by Python.

My blog powered by pelican and github project pages

A port of jakevdp.github.com to the Pelican platform

My automatic development environment setup and configuration tools.

My customized prezto framework

Experimental modifications to sorting toolchain in at-core

Mixture of Kalman filter model for spike sorting (using split & merge EM)

Core DataJoint schemas for experimental sessions

MySQL API for MATLAB with support for BLOB objects